Airbrushing,(1) •
Astrangia(4) •
BS SNPer(1) •
BUSCO,(2) •
Bioinformatics(1) •
Bleaching(20) •
Bleaching,(4) •
Carbohydrate,(1) •
CellRanger,(1) •
Central(6) •
CentralDoc(1) •
Cnidarin(1) •
Coral,(2) •
DNA(11) •
DNA,(25) •
Dark(1) •
Document(6) •
Extractions(1) •
Extractions,(5) •
Galaxea(4) •
Genes,(1) •
Geoduck(1) •
Goals(2) •
ITS2(2) •
ITS2,(7) •
Integration,(3) •
July(18) •
June(2) •
Juveniles(3) •
KOFamScan,(1) •
KoFamScan,(1) •
KofamScan,(1) •
Lab Notebook(1) •
Larvae(1) •
Larvae,(3) •
Lipid,(3) •
MAKER(1) •
Mcap2020(1) •
Metabolomics,(9) •
MinION,(1) •
Montipora(4) •
Nanodrop,(1) •
Nutrition(2) •
P.asteroides(1) •
PJB(2) •
PicoMethyl,(1) •
PicoMethyl seq(10) •
Pocillopora(2) •
Porites(98) •
Porites,(6) •
Protein(1) •
Protein,(1) •
RNA(10) •
RNA,(19) •
SAM(1) •
Symbiodinium(1) •
Symbiont(3) •
TAC(1) •
TEM(1) •
Tag Seq,(1) •
Tag seq(1) •
TagSeq(1) •
Tagseq,(1) •
Thermal(28) •
Total(1) •
Transplant(12) •
Transplant,(13) •
WGBS(3) •
WGBS,(16) •
acuta(2) •
annotation,(1) •
astreoides(12) •
astreoides,(63) •
augustus,(1) •
bioinfiormatics(1) •
bioinformatics(3) •
bioinformatics,(2) •
busco,(1) •
capitata(1) •
capitata,(3) •
cell(1) •
citrate(2) •
computing(1) •
coral,(1) •
extraction(1) •
fascicularis(1) •
genome,(3) •
geoduck(1) •
immunity(1) •
lab(1) •
larvae,(2) •
mansour(1) •
metabolomics(1) •
methylation,(1) •
methylseq,(1) •
nuclei(1) •
nutrition(1) •
poculata,(1) •
porites(5) •
scRNAseq(1) •
separation,(1) •
single(1) •
symbiodinium(1) •
synthase(2) •
tagseq,(1) •
thermal(1) •
transcriptome,BUSCO(1) •
transplant(3) •
transplant,(1)
Airbrushing, 1
- Airbrushing and Homogenizing Porites June Patch Adult Tissues • October 4, 2019
Astrangia 4
- 20210826 Lipid Extraction Species Test • August 26, 2021
- Astrangia Nutrition DNA Extractions • April 18, 2019
- Citrate Synthase for A. poculata nutrition experiment • April 28, 2019
- SAM ELISA Kit for A. poculata nutrition experiment • May 15, 2019
BS SNPer 1
- Testing BS-SNPer on WGBS data • November 21, 2022
BUSCO, 2
- 20201221 BUSCO on P. astreoides transcriptome assembly • December 21, 2020
- 20210104 BUSCO on P. astreoides transcriptome assembly • January 4, 2021
Bioinformatics 1
- Troubleshooting OrthoFinder • December 5, 2023
Bleaching 20
- 20201006 Adult P.astreoides Metabolomic Extractions • October 6, 2020
- 20201008 Adult P.astreoides Metabolomic Extractions • October 8, 2020
- 20201009 Adult P.astreoides Metabolomic Extractions • October 12, 2020
- 20201013 Adult P.astreoides Metabolomic Extractions • October 13, 2020
- 20201015 Adult P.astreoides Metabolomic Extractions • October 15, 2020
- 20201022 DNA RNA Extractions Porites July Bleaching Experiment • October 23, 2020
- 20201025 DNA RNA Extractions Porites July Bleaching Experiment • October 26, 2020
- 20201027 DNA RNA Extractions Porites July Bleaching Experiment • October 27, 2020
- 20201110 DNA RNA Extractions Porites July Bleaching Experiment • November 10, 2020
- 20201111 DNA RNA Extractions Porites July Bleaching Experiment • November 11, 2020
- 20201117 DNA RNA Extractions Porites July Bleaching Experiment • November 17, 2020
- 20201119 DNA RNA Extractions Porites July Bleaching Experiment • November 19, 2020
- 20201120 DNA RNA Extractions Porites July Bleaching Experiment • November 20, 2020
- 20201125 DNA RNA Extractions Porites July Bleaching Experiment • November 25, 2020
- 20201126 DNA RNA Extractions Porites July Bleaching Experiment • November 26, 2020
- 20201202 DNA RNA Extractions Porites July Bleaching Experiment • December 3, 2020
- 20210629 Total Protein Testing • June 30, 2021
- 20211104 ITS2 Test set for KW-AH-ES samples • November 4, 2021
- Airbrushing Protocol for Porites July Bleaching Project • June 11, 2021
- ITS2 KW-AH-ES samples • November 9, 2021
Bleaching, 4
- 20201020 Adult P.astreoides and AH test sample Metabolomic Extractions • October 20, 2020
- 20201029 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • October 29, 2020
- 20201106 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • November 6, 2020
- 20201203 Tag-Seq prep for Porites July Bleaching Experiment • December 3, 2020
Carbohydrate, 1
- 20210713 Carbohydrate Assay Test • July 14, 2021
CellRanger, 1
Central 6
- 16S Central Document • March 27, 2024
- DNA Methylation Central Document • March 27, 2024
- Genome Annotation Central Document • March 27, 2024
- ITS2 Central Document • March 27, 2024
- Metabolomics Central Document • March 27, 2024
- Transcriptomics Central Document • March 27, 2024
CentralDoc 1
- Single-cell RNAseq Central Document • March 27, 2024
Cnidarin 1
- Gfas_Syms_CellRanger_Analysis • January 31, 2024
Coral, 2
- Coral Nuclei Isolation Tests • November 8, 2022
- Coral processing for TEM imaging • January 30, 2023
DNA 11
- Astrangia Nutrition DNA Extractions • April 18, 2019
- BisSNP Analysis • August 4, 2023
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 3 • August 12, 2020
- DNA RNA Extractions Thermal Transplant ADULT AND LARVAE Trial 4 • January 13, 2020
- DNA RNA Extractions Thermal Transplant Porites LARVAE Trial 1 • December 5, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 1 • December 3, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 3 • December 5, 2019
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 5 • August 20, 2020
- DNA-RNA-Extraxtion-Thermal-Transplant-Porites-Homogenates • July 31, 2020
DNA, 25
- 20201022 DNA RNA Extractions Porites July Bleaching Experiment • October 23, 2020
- 20201025 DNA RNA Extractions Porites July Bleaching Experiment • October 26, 2020
- 20201027 DNA RNA Extractions Porites July Bleaching Experiment • October 27, 2020
- 20201029 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • October 29, 2020
- 20201106 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • November 6, 2020
- 20201110 DNA RNA Extractions Porites July Bleaching Experiment • November 10, 2020
- 20201111 DNA RNA Extractions Porites July Bleaching Experiment • November 11, 2020
- 20201117 DNA RNA Extractions Porites July Bleaching Experiment • November 17, 2020
- 20201119 DNA RNA Extractions Porites July Bleaching Experiment • November 19, 2020
- 20201120 DNA RNA Extractions Porites July Bleaching Experiment • November 20, 2020
- 20201125 DNA RNA Extractions Porites July Bleaching Experiment • November 25, 2020
- 20201126 DNA RNA Extractions Porites July Bleaching Experiment • November 26, 2020
- 20201202 DNA RNA Extractions Porites July Bleaching Experiment • December 3, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant • August 6, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 2 • August 7, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 4 • August 13, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 5 • August 14, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 6 • August 19, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 7 • August 21, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 8 • February 8, 2021
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING • August 12, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 2 • August 13, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 3 • August 14, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 4 • August 19, 2020
- DNA-RNA extractions Porites Thermal Transplant Larvae BATCH 1 • August 6, 2020
Dark 1
- Galaxea Bleaching Trials • March 21, 2023
Document 6
- 16S Central Document • March 27, 2024
- DNA Methylation Central Document • March 27, 2024
- Genome Annotation Central Document • March 27, 2024
- ITS2 Central Document • March 27, 2024
- Metabolomics Central Document • March 27, 2024
- Transcriptomics Central Document • March 27, 2024
Extractions 1
- DNA RNA Extractions Thermal Transplant Porites Trial 3 • December 5, 2019
Extractions, 5
- DNA RNA Extractions Thermal Transplant ADULT AND LARVAE Trial 4 • January 13, 2020
- DNA RNA Extractions Thermal Transplant Porites LARVAE Trial 1 • December 5, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 1 • December 3, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
Galaxea 4
- Galaxea Airbrush, cell count, and RNA extraction test • November 29, 2022
- Galaxea Bleaching Trials • March 21, 2023
- Galaxea fascicularis welcome party to the Cnimmunity lab • November 15, 2022
- Genome Annotation on Galaxea fasicularis • September 11, 2023
Genes, 1
- Galaxea Bleaching Trials • March 21, 2023
Geoduck 1
- DNA-RNA-Extractions-Thermal-Transplant-Porites-and-Geoduck • July 30, 2020
Goals 2
- February Goals • February 13, 2018
- November Goals • November 9, 2017
ITS2 2
- 20210302 Thermal Transplant ITS2 • March 4, 2021
- Thermal Transplant ITS2 Test • February 18, 2021
ITS2, 7
- 20210309 Thermal Transplant ITS2 • March 10, 2021
- 20210325 Thermal Transplant ITS2 • March 25, 2021
- 20211104 ITS2 Test set for KW-AH-ES samples • November 4, 2021
- 20220319 PJB ITS2 re-seq • March 21, 2022
- ITS2 KW-AH-ES samples • November 9, 2021
- PJB ITS2 Re-seq Analysis • August 12, 2022
- Touchdown PCR for ITS2 • March 16, 2022
Integration, 3
- 20210321 Symbiont Integration Metabolomics Extractions BATCH 1 • March 22, 2021
- 20210325 Symbiont Integration Metabolomics Extractions BATCH 2 • March 25, 2021
- Symbiont Integration Metabolomics Processing (20210321 - 20210414) • April 16, 2021
July 18
- 20201022 DNA RNA Extractions Porites July Bleaching Experiment • October 23, 2020
- 20201025 DNA RNA Extractions Porites July Bleaching Experiment • October 26, 2020
- 20201027 DNA RNA Extractions Porites July Bleaching Experiment • October 27, 2020
- 20201029 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • October 29, 2020
- 20201106 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • November 6, 2020
- 20201110 DNA RNA Extractions Porites July Bleaching Experiment • November 10, 2020
- 20201111 DNA RNA Extractions Porites July Bleaching Experiment • November 11, 2020
- 20201117 DNA RNA Extractions Porites July Bleaching Experiment • November 17, 2020
- 20201119 DNA RNA Extractions Porites July Bleaching Experiment • November 19, 2020
- 20201120 DNA RNA Extractions Porites July Bleaching Experiment • November 20, 2020
- 20201125 DNA RNA Extractions Porites July Bleaching Experiment • November 25, 2020
- 20201126 DNA RNA Extractions Porites July Bleaching Experiment • November 26, 2020
- 20201202 DNA RNA Extractions Porites July Bleaching Experiment • December 3, 2020
- 20201203 Tag-Seq prep for Porites July Bleaching Experiment • December 3, 2020
- 20210629 Total Protein Testing • June 30, 2021
- 20211104 ITS2 Test set for KW-AH-ES samples • November 4, 2021
- Airbrushing Protocol for Porites July Bleaching Project • June 11, 2021
- ITS2 KW-AH-ES samples • November 9, 2021
June 2
- Airbrushing and Homogenizing Porites June Patch Adult Tissues • October 4, 2019
- Total Antioxidant Capacity Porites June Patch Adult tissues • October 4, 2019
Juveniles 3
- 20201020 Adult P.astreoides and AH test sample Metabolomic Extractions • October 20, 2020
- 20210321 Symbiont Integration Metabolomics Extractions BATCH 1 • March 22, 2021
- 20210325 Symbiont Integration Metabolomics Extractions BATCH 2 • March 25, 2021
KOFamScan, 1
- KOFamScan for P. astreoides • August 7, 2023
KoFamScan, 1
- Genome Annotation on Galaxea fasicularis • September 11, 2023
KofamScan, 1
- KofamScan Workflow • March 23, 2023
Lab Notebook 1
- Lab Notebook Generation • October 16, 2017
Larvae 1
- DNA RNA Extractions Thermal Transplant Porites LARVAE Trial 1 • December 5, 2019
Larvae, 3
- 20201020 Adult P.astreoides and AH test sample Metabolomic Extractions • October 20, 2020
- 20210321 Symbiont Integration Metabolomics Extractions BATCH 1 • March 22, 2021
- 20210325 Symbiont Integration Metabolomics Extractions BATCH 2 • March 25, 2021
Lipid, 3
- 20210622 Lipid Assay Trial • June 23, 2021
- 20210624 Lipid Assay Trial • June 25, 2021
- 20210826 Lipid Extraction Species Test • August 26, 2021
MAKER 1
- Past genome MAKER rnd 1 troubleshooting • August 19, 2021
Mcap2020 1
- 20210712 AH Tag-seq Plate Prep • July 12, 2021
Metabolomics, 9
- 20201006 Adult P.astreoides Metabolomic Extractions • October 6, 2020
- 20201008 Adult P.astreoides Metabolomic Extractions • October 8, 2020
- 20201009 Adult P.astreoides Metabolomic Extractions • October 12, 2020
- 20201013 Adult P.astreoides Metabolomic Extractions • October 13, 2020
- 20201015 Adult P.astreoides Metabolomic Extractions • October 15, 2020
- 20201020 Adult P.astreoides and AH test sample Metabolomic Extractions • October 20, 2020
- 20210321 Symbiont Integration Metabolomics Extractions BATCH 1 • March 22, 2021
- 20210325 Symbiont Integration Metabolomics Extractions BATCH 2 • March 25, 2021
- Symbiont Integration Metabolomics Processing (20210321 - 20210414) • April 16, 2021
MinION, 1
- Direct RNA sequencing on Oxford Nanopore MinION Protocol • October 24, 2023
Montipora 4
- 20210713 Carbohydrate Assay Test • July 14, 2021
- 20210826 Lipid Extraction Species Test • August 26, 2021
- ITS2 KW-AH-ES samples • November 9, 2021
- Symbiont Integration Metabolomics Processing (20210321 - 20210414) • April 16, 2021
Nanodrop, 1
- 20210121 Nanodrop results on Tag-Seq samples • January 21, 2021
Nutrition 2
- Airbrushing and Homogenizing Porites June Patch Adult Tissues • October 4, 2019
- Total Antioxidant Capacity Porites June Patch Adult tissues • October 4, 2019
P.asteroides 1
- Zymo-DNA-RNA-Extract-P.astreoides-Genome • March 13, 2019
PJB 2
- 20220319 PJB ITS2 re-seq • March 21, 2022
- PJB ITS2 Re-seq Analysis • August 12, 2022
PicoMethyl, 1
- Thermal Transplant WGBS PicoMethyl Protocol • April 16, 2021
PicoMethyl seq 10
- 20210401 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 1 • April 1, 2021
- 20210415 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 2 • April 15, 2021
- 20210422 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 3 • April 23, 2021
- 20210426 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 4 • April 27, 2021
- 20210428 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 5 • April 29, 2021
- 20210504 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 6 • May 4, 2021
- 20210506 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 7 • May 6, 2021
- 20210510 WGBS PicoMethyl-seq library re-amplification • May 10, 2021
- 20210512 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 8 • May 12, 2021
- 20210526 WGBS PicoMethyl-seq library re-amplification 2 • May 26, 2021
Pocillopora 2
- 20210713 Carbohydrate Assay Test • July 14, 2021
- 20210826 Lipid Extraction Species Test • August 26, 2021
Porites 98
- 20201006 Adult P.astreoides Metabolomic Extractions • October 6, 2020
- 20201008 Adult P.astreoides Metabolomic Extractions • October 8, 2020
- 20201009 Adult P.astreoides Metabolomic Extractions • October 12, 2020
- 20201013 Adult P.astreoides Metabolomic Extractions • October 13, 2020
- 20201015 Adult P.astreoides Metabolomic Extractions • October 15, 2020
- 20201020 Adult P.astreoides and AH test sample Metabolomic Extractions • October 20, 2020
- 20201022 DNA RNA Extractions Porites July Bleaching Experiment • October 23, 2020
- 20201025 DNA RNA Extractions Porites July Bleaching Experiment • October 26, 2020
- 20201027 DNA RNA Extractions Porites July Bleaching Experiment • October 27, 2020
- 20201029 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • October 29, 2020
- 20201106 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • November 6, 2020
- 20201110 DNA RNA Extractions Porites July Bleaching Experiment • November 10, 2020
- 20201111 DNA RNA Extractions Porites July Bleaching Experiment • November 11, 2020
- 20201117 DNA RNA Extractions Porites July Bleaching Experiment • November 17, 2020
- 20201119 DNA RNA Extractions Porites July Bleaching Experiment • November 19, 2020
- 20201120 DNA RNA Extractions Porites July Bleaching Experiment • November 20, 2020
- 20201125 DNA RNA Extractions Porites July Bleaching Experiment • November 25, 2020
- 20201126 DNA RNA Extractions Porites July Bleaching Experiment • November 26, 2020
- 20201202 DNA RNA Extractions Porites July Bleaching Experiment • December 3, 2020
- 20201203 Tag-Seq prep for Porites July Bleaching Experiment • December 3, 2020
- 20210121 Nanodrop results on Tag-Seq samples • January 21, 2021
- 20210302 Thermal Transplant ITS2 • March 4, 2021
- 20210309 Thermal Transplant ITS2 • March 10, 2021
- 20210325 Thermal Transplant ITS2 • March 25, 2021
- 20210401 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 1 • April 1, 2021
- 20210415 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 2 • April 15, 2021
- 20210422 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 3 • April 23, 2021
- 20210426 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 4 • April 27, 2021
- 20210428 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 5 • April 29, 2021
- 20210504 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 6 • May 4, 2021
- 20210506 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 7 • May 6, 2021
- 20210510 WGBS PicoMethyl-seq library re-amplification • May 10, 2021
- 20210512 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 8 • May 12, 2021
- 20210526 WGBS PicoMethyl-seq library re-amplification 2 • May 26, 2021
- 20210622 Lipid Assay Trial • June 23, 2021
- 20210624 Lipid Assay Trial • June 25, 2021
- 20210629 Total Protein Testing • June 30, 2021
- 20210713 Carbohydrate Assay Test • July 14, 2021
- 20210826 Lipid Extraction Species Test • August 26, 2021
- 20211104 ITS2 Test set for KW-AH-ES samples • November 4, 2021
- Airbrushing Protocol for Porites July Bleaching Project • June 11, 2021
- Airbrushing and Homogenizing Porites June Patch Adult Tissues • October 4, 2019
- BUSCO on Pastreoides reference transcriptomes • September 30, 2021
- DNA Extractions for adult homogenates of Porites Thermal Transplant • August 6, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 2 • August 7, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 3 • August 12, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 4 • August 13, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 5 • August 14, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 6 • August 19, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 7 • August 21, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 8 • February 8, 2021
- DNA RNA Extractions Thermal Transplant ADULT AND LARVAE Trial 4 • January 13, 2020
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING • August 12, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 2 • August 13, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 3 • August 14, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 4 • August 19, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 5 • August 20, 2020
- DNA-RNA extractions Porites Thermal Transplant Larvae BATCH 1 • August 6, 2020
- Epidiverse WBGS testing • August 21, 2023
- HIAST2 alignment with Mansour transcriptome • October 22, 2021
- ITS2 KW-AH-ES samples • November 9, 2021
- KOFamScan for P. astreoides • August 7, 2023
- Metabolomics P astreoides sample prep • February 3, 2020
- Methylseq trimming test to remove m-bias • November 16, 2021
- NF-CORE Methylseq Thermal Transplant • October 21, 2021
- PJB ITS2 Re-seq Analysis • August 12, 2022
- Porites astreoides genome annotation • April 25, 2022
- Thermal Transplant ITS2 Test • February 18, 2021
- Thermal Transplant WGBS PicoMethyl Protocol • April 16, 2021
- Total Antioxidant Capacity Porites June Patch Adult tissues • October 4, 2019
- Touchdown PCR for ITS2 • March 16, 2022
- Troubleshooting WGBS Scripts • October 18, 2022
Porites, 6
- DNA RNA Extractions Thermal Transplant Porites LARVAE Trial 1 • December 5, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 1 • December 3, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 3 • December 5, 2019
- DNA-RNA Extractions Porites astreoides homogenates, larvae, and adult fragments • August 5, 2020
- DNA-RNA-Extractions-Thermal-Transplant-Porites-and-Geoduck • July 30, 2020
- DNA-RNA-Extraxtion-Thermal-Transplant-Porites-Homogenates • July 31, 2020
Protein 1
- Total Protein Extraction Protocol • October 5, 2018
Protein, 1
- 20210629 Total Protein Testing • June 30, 2021
RNA 10
- DNA RNA Extractions Thermal Transplant ADULT AND LARVAE Trial 4 • January 13, 2020
- DNA RNA Extractions Thermal Transplant Porites LARVAE Trial 1 • December 5, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 1 • December 3, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 3 • December 5, 2019
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING • August 12, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 3 • August 14, 2020
- DNA-RNA-Extraxtion-Thermal-Transplant-Porites-Homogenates • July 31, 2020
- Direct RNA sequencing on Oxford Nanopore MinION Protocol • October 24, 2023
RNA, 19
- 20201022 DNA RNA Extractions Porites July Bleaching Experiment • October 23, 2020
- 20201025 DNA RNA Extractions Porites July Bleaching Experiment • October 26, 2020
- 20201027 DNA RNA Extractions Porites July Bleaching Experiment • October 27, 2020
- 20201029 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • October 29, 2020
- 20201106 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • November 6, 2020
- 20201110 DNA RNA Extractions Porites July Bleaching Experiment • November 10, 2020
- 20201111 DNA RNA Extractions Porites July Bleaching Experiment • November 11, 2020
- 20201117 DNA RNA Extractions Porites July Bleaching Experiment • November 17, 2020
- 20201119 DNA RNA Extractions Porites July Bleaching Experiment • November 19, 2020
- 20201120 DNA RNA Extractions Porites July Bleaching Experiment • November 20, 2020
- 20201125 DNA RNA Extractions Porites July Bleaching Experiment • November 25, 2020
- 20201126 DNA RNA Extractions Porites July Bleaching Experiment • November 26, 2020
- 20201202 DNA RNA Extractions Porites July Bleaching Experiment • December 3, 2020
- 20201203 Tag-Seq prep for Porites July Bleaching Experiment • December 3, 2020
- 20210121 Nanodrop results on Tag-Seq samples • January 21, 2021
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 2 • August 13, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 4 • August 19, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 5 • August 20, 2020
- DNA-RNA extractions Porites Thermal Transplant Larvae BATCH 1 • August 6, 2020
SAM 1
- SAM ELISA Kit for A. poculata nutrition experiment • May 15, 2019
Symbiodinium 1
- Symbiodinium Density Analysis Protocol • August 16, 2018
Symbiont 3
- 20210321 Symbiont Integration Metabolomics Extractions BATCH 1 • March 22, 2021
- 20210325 Symbiont Integration Metabolomics Extractions BATCH 2 • March 25, 2021
- Symbiont Integration Metabolomics Processing (20210321 - 20210414) • April 16, 2021
TAC 1
- Total Antioxidant Capacity Porites June Patch Adult tissues • October 4, 2019
TEM 1
- Coral processing for TEM imaging • January 30, 2023
Tag Seq, 1
- 20210121 Nanodrop results on Tag-Seq samples • January 21, 2021
Tag seq 1
- 20201203 Tag-Seq prep for Porites July Bleaching Experiment • December 3, 2020
TagSeq 1
- Old Tag-seq analysis for PJB • April 27, 2022
Tagseq, 1
- 20210712 AH Tag-seq Plate Prep • July 12, 2021
Thermal 28
- 20210302 Thermal Transplant ITS2 • March 4, 2021
- 20210309 Thermal Transplant ITS2 • March 10, 2021
- 20210325 Thermal Transplant ITS2 • March 25, 2021
- DNA Extractions for adult homogenates of Porites Thermal Transplant • August 6, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 2 • August 7, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 3 • August 12, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 4 • August 13, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 5 • August 14, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 6 • August 19, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 7 • August 21, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 8 • February 8, 2021
- DNA RNA Extractions Thermal Transplant ADULT AND LARVAE Trial 4 • January 13, 2020
- DNA RNA Extractions Thermal Transplant Porites LARVAE Trial 1 • December 5, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 1 • December 3, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 3 • December 5, 2019
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING • August 12, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 2 • August 13, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 3 • August 14, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 4 • August 19, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 5 • August 20, 2020
- DNA-RNA extractions Porites Thermal Transplant Larvae BATCH 1 • August 6, 2020
- DNA-RNA-Extractions-Thermal-Transplant-Porites-and-Geoduck • July 30, 2020
- DNA-RNA-Extraxtion-Thermal-Transplant-Porites-Homogenates • July 31, 2020
- Methylseq trimming test to remove m-bias • November 16, 2021
- Thermal Transplant ITS2 Test • February 18, 2021
- Thermal Transplant WGBS PicoMethyl Protocol • April 16, 2021
Total 1
- 20210629 Total Protein Testing • June 30, 2021
Transplant 12
- DNA Extractions for adult homogenates of Porites Thermal Transplant • August 6, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 2 • August 7, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 4 • August 13, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 5 • August 14, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 6 • August 19, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 7 • August 21, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 8 • February 8, 2021
- DNA RNA Extractions Thermal Transplant ADULT AND LARVAE Trial 4 • January 13, 2020
- DNA RNA Extractions Thermal Transplant Porites Trial 1 • December 3, 2019
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 2 • August 13, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 4 • August 19, 2020
- DNA-RNA extractions Porites Thermal Transplant Larvae BATCH 1 • August 6, 2020
Transplant, 13
- 20210302 Thermal Transplant ITS2 • March 4, 2021
- 20210309 Thermal Transplant ITS2 • March 10, 2021
- 20210325 Thermal Transplant ITS2 • March 25, 2021
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 3 • August 12, 2020
- DNA RNA Extractions Thermal Transplant Porites LARVAE Trial 1 • December 5, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 2 • December 4, 2019
- DNA RNA Extractions Thermal Transplant Porites Trial 3 • December 5, 2019
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 3 • August 14, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 5 • August 20, 2020
- DNA-RNA-Extractions-Thermal-Transplant-Porites-and-Geoduck • July 30, 2020
- DNA-RNA-Extraxtion-Thermal-Transplant-Porites-Homogenates • July 31, 2020
- Thermal Transplant ITS2 Test • February 18, 2021
WGBS 3
- 20201029 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • October 29, 2020
- 20201106 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • November 6, 2020
- EpiDiverse SNP Analysis • March 15, 2023
WGBS, 16
- 20210401 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 1 • April 1, 2021
- 20210415 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 2 • April 15, 2021
- 20210422 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 3 • April 23, 2021
- 20210426 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 4 • April 27, 2021
- 20210428 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 5 • April 29, 2021
- 20210504 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 6 • May 4, 2021
- 20210506 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 7 • May 6, 2021
- 20210510 WGBS PicoMethyl-seq library re-amplification • May 10, 2021
- 20210512 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 8 • May 12, 2021
- 20210526 WGBS PicoMethyl-seq library re-amplification 2 • May 26, 2021
- Epidiverse WBGS testing • August 21, 2023
- Methylseq trimming test to remove m-bias • November 16, 2021
- NF-CORE Methylseq Thermal Transplant • October 21, 2021
- Testing BS-SNPer on WGBS data • November 21, 2022
- Thermal Transplant WGBS PicoMethyl Protocol • April 16, 2021
- Troubleshooting WGBS Scripts • October 18, 2022
acuta 2
- 20210713 Carbohydrate Assay Test • July 14, 2021
- 20210826 Lipid Extraction Species Test • August 26, 2021
annotation, 1
- Past genome MAKER rnd 1 troubleshooting • August 19, 2021
astreoides 12
- 20201221 BUSCO on P. astreoides transcriptome assembly • December 21, 2020
- 20210104 BUSCO on P. astreoides transcriptome assembly • January 4, 2021
- 20210309 Thermal Transplant ITS2 • March 10, 2021
- 20210325 Thermal Transplant ITS2 • March 25, 2021
- 20210622 Lipid Assay Trial • June 23, 2021
- 20210624 Lipid Assay Trial • June 25, 2021
- BisSNP Analysis • August 4, 2023
- Epidiverse WBGS testing • August 21, 2023
- KOFamScan for P. astreoides • August 7, 2023
- Metabolomics P astreoides sample prep • February 3, 2020
- Touchdown PCR for ITS2 • March 16, 2022
- Troubleshooting WGBS Scripts • October 18, 2022
astreoides, 63
- 20201006 Adult P.astreoides Metabolomic Extractions • October 6, 2020
- 20201008 Adult P.astreoides Metabolomic Extractions • October 8, 2020
- 20201009 Adult P.astreoides Metabolomic Extractions • October 12, 2020
- 20201013 Adult P.astreoides Metabolomic Extractions • October 13, 2020
- 20201015 Adult P.astreoides Metabolomic Extractions • October 15, 2020
- 20201020 Adult P.astreoides and AH test sample Metabolomic Extractions • October 20, 2020
- 20201022 DNA RNA Extractions Porites July Bleaching Experiment • October 23, 2020
- 20201025 DNA RNA Extractions Porites July Bleaching Experiment • October 26, 2020
- 20201027 DNA RNA Extractions Porites July Bleaching Experiment • October 27, 2020
- 20201029 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • October 29, 2020
- 20201106 DNA RNA Extractions Porites July Bleaching Experiment and WGBS samples • November 6, 2020
- 20201110 DNA RNA Extractions Porites July Bleaching Experiment • November 10, 2020
- 20201111 DNA RNA Extractions Porites July Bleaching Experiment • November 11, 2020
- 20201117 DNA RNA Extractions Porites July Bleaching Experiment • November 17, 2020
- 20201119 DNA RNA Extractions Porites July Bleaching Experiment • November 19, 2020
- 20201120 DNA RNA Extractions Porites July Bleaching Experiment • November 20, 2020
- 20201125 DNA RNA Extractions Porites July Bleaching Experiment • November 25, 2020
- 20201126 DNA RNA Extractions Porites July Bleaching Experiment • November 26, 2020
- 20201202 DNA RNA Extractions Porites July Bleaching Experiment • December 3, 2020
- 20201203 Tag-Seq prep for Porites July Bleaching Experiment • December 3, 2020
- 20210121 Nanodrop results on Tag-Seq samples • January 21, 2021
- 20210302 Thermal Transplant ITS2 • March 4, 2021
- 20210401 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 1 • April 1, 2021
- 20210415 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 2 • April 15, 2021
- 20210422 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 3 • April 23, 2021
- 20210426 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 4 • April 27, 2021
- 20210428 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 5 • April 29, 2021
- 20210504 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 6 • May 4, 2021
- 20210506 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 7 • May 6, 2021
- 20210510 WGBS PicoMethyl-seq library re-amplification • May 10, 2021
- 20210512 WGBS PicoMethyl-seq library prep for Thermal Transplant Trial 8 • May 12, 2021
- 20210526 WGBS PicoMethyl-seq library re-amplification 2 • May 26, 2021
- 20210629 Total Protein Testing • June 30, 2021
- 20210713 Carbohydrate Assay Test • July 14, 2021
- 20210826 Lipid Extraction Species Test • August 26, 2021
- Airbrushing Protocol for Porites July Bleaching Project • June 11, 2021
- Airbrushing and Homogenizing Porites June Patch Adult Tissues • October 4, 2019
- BUSCO on Pastreoides reference transcriptomes • September 30, 2021
- DNA Extractions for adult homogenates of Porites Thermal Transplant • August 6, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 2 • August 7, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 3 • August 12, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 4 • August 13, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 5 • August 14, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 6 • August 19, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 7 • August 21, 2020
- DNA Extractions for adult homogenates of Porites Thermal Transplant Batch 8 • February 8, 2021
- DNA RNA Extractions Thermal Transplant ADULT AND LARVAE Trial 4 • January 13, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING • August 12, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 2 • August 13, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 3 • August 14, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 4 • August 19, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 5 • August 20, 2020
- DNA-RNA extractions Porites Thermal Transplant Larvae BATCH 1 • August 6, 2020
- HIAST2 alignment with Mansour transcriptome • October 22, 2021
- ITS2 KW-AH-ES samples • November 9, 2021
- Methylseq trimming test to remove m-bias • November 16, 2021
- NF-CORE Methylseq Thermal Transplant • October 21, 2021
- PJB ITS2 Re-seq Analysis • August 12, 2022
- Past genome MAKER rnd 1 troubleshooting • August 19, 2021
- Porites astreoides genome annotation • April 25, 2022
- Thermal Transplant ITS2 Test • February 18, 2021
- Thermal Transplant WGBS PicoMethyl Protocol • April 16, 2021
- Training AUGUSTUS with BUSCO • October 21, 2021
augustus, 1
- Training AUGUSTUS with BUSCO • October 21, 2021
bioinfiormatics 1
- Training AUGUSTUS with BUSCO • October 21, 2021
bioinformatics 3
- KofamScan Workflow • March 23, 2023
- NF-CORE Methylseq Thermal Transplant • October 21, 2021
- Porites astreoides genome annotation • April 25, 2022
bioinformatics, 2
- 20201221 BUSCO on P. astreoides transcriptome assembly • December 21, 2020
- 20210104 BUSCO on P. astreoides transcriptome assembly • January 4, 2021
busco, 1
- Training AUGUSTUS with BUSCO • October 21, 2021
capitata 1
- Symbiont Integration Metabolomics Processing (20210321 - 20210414) • April 16, 2021
capitata, 3
- 20210713 Carbohydrate Assay Test • July 14, 2021
- 20210826 Lipid Extraction Species Test • August 26, 2021
- ITS2 KW-AH-ES samples • November 9, 2021
cell 1
- 20240122 Gfas single cell fresh vs frozen analysis • January 22, 2024
citrate 2
- Citrate Synthase Troubleshooting • March 14, 2019
- Citrate Synthase for A. poculata nutrition experiment • April 28, 2019
computing 1
- Lab Notebook Generation • October 16, 2017
coral, 1
- Adult coral Homogenate prep and symbiont separation • April 24, 2019
extraction 1
- DNA-RNA-Extraxtion-Thermal-Transplant-Porites-Homogenates • July 31, 2020
fascicularis 1
- Galaxea fascicularis welcome party to the Cnimmunity lab • November 15, 2022
genome, 3
- Past genome MAKER rnd 1 troubleshooting • August 19, 2021
- Porites astreoides genome annotation • April 25, 2022
- Training AUGUSTUS with BUSCO • October 21, 2021
geoduck 1
- 20210121 Nanodrop results on Tag-Seq samples • January 21, 2021
immunity 1
- Gfas_Syms_CellRanger_Analysis • January 31, 2024
lab 1
- Gfas_Syms_CellRanger_Analysis • January 31, 2024
larvae, 2
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 3 • August 14, 2020
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING Batch 5 • August 20, 2020
mansour 1
- HIAST2 alignment with Mansour transcriptome • October 22, 2021
metabolomics 1
- Metabolomics P astreoides sample prep • February 3, 2020
methylation, 1
- BisSNP Analysis • August 4, 2023
methylseq, 1
- NF-CORE Methylseq Thermal Transplant • October 21, 2021
nuclei 1
- Coral Nuclei Isolation Tests • November 8, 2022
nutrition 1
- Citrate Synthase for A. poculata nutrition experiment • April 28, 2019
poculata, 1
- 20210826 Lipid Extraction Species Test • August 26, 2021
porites 5
- 20201221 BUSCO on P. astreoides transcriptome assembly • December 21, 2020
- 20210104 BUSCO on P. astreoides transcriptome assembly • January 4, 2021
- BisSNP Analysis • August 4, 2023
- Past genome MAKER rnd 1 troubleshooting • August 19, 2021
- Training AUGUSTUS with BUSCO • October 21, 2021
scRNAseq 1
separation, 1
- Adult coral Homogenate prep and symbiont separation • April 24, 2019
single 1
- 20240122 Gfas single cell fresh vs frozen analysis • January 22, 2024
symbiodinium 1
- Adult coral Homogenate prep and symbiont separation • April 24, 2019
synthase 2
- Citrate Synthase Troubleshooting • March 14, 2019
- Citrate Synthase for A. poculata nutrition experiment • April 28, 2019
tagseq, 1
- HIAST2 alignment with Mansour transcriptome • October 22, 2021
thermal 1
transcriptome,BUSCO 1
- BUSCO on Pastreoides reference transcriptomes • September 30, 2021
transplant 3
- DNA-RNA Extractions Porites astreoides homogenates, larvae, and adult fragments • August 5, 2020
- Methylseq trimming test to remove m-bias • November 16, 2021
- Thermal Transplant WGBS PicoMethyl Protocol • April 16, 2021
transplant, 1
- DNA RNA Extractions on P. astreoides larvae - BEAD BEATING • August 12, 2020