20201110 DNA RNA Extractions Porites July Bleaching Experiment
Project: Porites Bleaching 2019
Goal
To test DNA and RNA extractions on adult Porites astreoides samples for the Porites Bleaching 2019 experiment using this protocol.
Samples
Today I am using 6 adult P. astreoides samples that were snap frozen in the field. All of these samples are whole fragments that are stored at -80°C.
Vial # | Timepoint | Coral ID |
---|---|---|
25 | A4 | R23 |
26 | A4 | R29 |
27 | A2 | R23 |
28 | A2 | R11 |
29 | A1 | R19 |
30 | A1 | R20 |
Quantify Results
Qubit
To test DNA quantity: Qubit
I used DNA and RNA broad range.
DNA (ng/uL) | RNA (ng/uL) | |
---|---|---|
Standard 1 | 175.34 | 398.35 |
Standard 2 | 19251.93 | 8705.28 |
25 | 3.86 | LOW |
26 | 22.6 | 12.4 |
27 | 30.8 | 13.6 |
28 | 9.02 | 13.2 |
29 | 13.5 | 36.2 |
30 | 7.32 | 25.6 |
Gel
To test DNA quality: Gel Electrophoresis
TapeStation
Summary:
Sample #29:
Sample #30:
Full TapeStation report can be found here
Written on November 10, 2020