20201111 DNA RNA Extractions Porites July Bleaching Experiment
Project: Porites Bleaching 2019
Goal
To test DNA and RNA extractions on adult Porites astreoides samples for the Porites Bleaching 2019 experiment using this protocol.
Samples
Today I am using 6 adult P. astreoides samples that were snap frozen in the field. All of these samples are whole fragments that are stored at -80°C.
Vial # | Timepoint | Coral ID |
---|---|---|
31 | A1 | R8 |
32 | A1 | R11 |
33 | A4 | R32 |
34 | A4 | R7 |
35 | A2 | R32 |
36 | A2 | R28 |
Quantify Results
Qubit
To test DNA quantity: Qubit
I used DNA and RNA broad range.
DNA (ng/uL) | RNA (ng/uL) | |
---|---|---|
Standard 1 | 193.90 | 404.40 |
Standard 2 | 20316.17 | 9390.68 |
31 | 5.84 | 13.0 |
32 | 35.6 | 38.8 |
33 | 12.0 | 13.4 |
34 | 27.4 | 25.4 |
35 | 6.44 | 17.8 |
36 | 5.94 | 10.2 |
Gel
To test DNA quality: Gel Electrophoresis
TapeStation
Summary:
Sample #31:
Sample #32:
Sample #33:
Sample #34:
Sample #35:
Sample #36:
Full TapeStation report can be found here
Written on November 11, 2020