20201117 DNA RNA Extractions Porites July Bleaching Experiment

Project: Porites Bleaching 2019

Goal

To test DNA and RNA extractions on adult Porites astreoides samples for the Porites Bleaching 2019 experiment using this protocol.

Samples

Today I am using 10 adult P. astreoides samples that were snap frozen in the field. All of these samples are whole fragments that are stored at -80°C.

Vial # Timepoint Coral ID
37 A2 R7
38 A2 R36
39 A2 R19
40 A4 R36
41 A4 R35
42 A4 R37
43 A4 R8
44 A1 R29
45 A1 R40
46 A1 R26

Quantify Results

Qubit

To test DNA quantity: Qubit

I used DNA and RNA broad range.

  DNA (ng/uL) RNA (ng/uL)
Standard 1 192.89 392.97
Standard 2 21333.20 8666.78
37 12.0 24.0
38 19.4 15.2
39 27.8 14.8
40 13.5 14.2
41 14.9 10.8
42 26.0 13.6
43 14.4 25.0
44 12.3 13.2
45 20.2 13.6
46 41.2 16.4

Gel

To test DNA quality: Gel Electrophoresis

Gel

TapeStation

Summary: Summary

Full TapeStation report can be found here

Written on November 17, 2020